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IPPS
2005
IEEE
15 years 8 months ago
A Case Study on Pattern-Based Systems for High Performance Computational Biology
Computational biology research is now faced with the burgeoning number of genome data. The rigorous postprocessing of this data requires an increased role for high performance com...
Weiguo Liu, Bertil Schmidt
IEEEPACT
2009
IEEE
15 years 9 months ago
Quantifying the Potential of Program Analysis Peripherals
Abstract—As programmers are asked to manage more complicated parallel machines, it is likely that they will become increasingly dependent on tools such as multi-threaded data rac...
Mohit Tiwari, Shashidhar Mysore, Timothy Sherwood
IPPS
2003
IEEE
15 years 7 months ago
Parallelisation of IBD Computation for Determining Genetic Disease Map
A number of software packages are available for the construction of comprehensive human genetic maps. In this paper we parallelize the widely used package Genehunter. We restrict ...
Nouhad J. Rizk
CONPAR
1994
15 years 6 months ago
The Rewrite Rule Machine Node Architecture and Its Performance
The Rewrite Rule Machine (RRM) is a massively parallel MIMD/SIMD computer designed with the explicit purpose of supporting veryhigh-level parallel programming with rewrite rules. T...
Patrick Lincoln, José Meseguer, Livio Ricci...
HPCA
1998
IEEE
15 years 6 months ago
Speculative Versioning Cache
Dependences among loads and stores whose addresses are unknown hinder the extraction of instruction level parallelism during the execution of a sequential program. Such ambiguous ...
Sridhar Gopal, T. N. Vijaykumar, James E. Smith, G...