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» Parallel Tree Projection Algorithm for Sequence Mining
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BMCBI
2007
162views more  BMCBI 2007»
13 years 7 months ago
Three-Dimensional Phylogeny Explorer: Distinguishing paralogs, lateral transfer, and violation of "molecular clock" assumption w
Background: Construction and interpretation of phylogenetic trees has been a major research topic for understanding the evolution of genes. Increases in sequence data and complexi...
Namshin Kim, Christopher Lee
BMCBI
2010
189views more  BMCBI 2010»
13 years 7 months ago
Efficient parallel and out of core algorithms for constructing large bi-directed de Bruijn graphs
Background: Assembling genomic sequences from a set of overlapping reads is one of the most fundamental problems in computational biology. Algorithms addressing the assembly probl...
Vamsi Kundeti, Sanguthevar Rajasekaran, Hieu Dinh,...
ICDE
2010
IEEE
290views Database» more  ICDE 2010»
13 years 11 months ago
The Model-Summary Problem and a Solution for Trees
Modern science is collecting massive amounts of data from sensors, instruments, and through computer simulation. It is widely believed that analysis of this data will hold the key ...
Biswanath Panda, Mirek Riedewald, Daniel Fink
DMIN
2007
158views Data Mining» more  DMIN 2007»
13 years 8 months ago
Mining Frequent Itemsets Using Re-Usable Data Structure
- Several algorithms have been introduced for mining frequent itemsets. The recent datasettransformation approach suffers either from the possible increasing in the number of struc...
Mohamed Yakout, Alaaeldin M. Hafez, Hussein Aly
IPPS
2002
IEEE
14 years 10 days ago
Parallel Incremental 2D-Discretization on Dynamic Datasets
Most current work in data mining assumes that the database is static, and a database update requires rediscovering all the patterns by scanning the entire old and new database. Su...
Srinivasan Parthasarathy, Arun Ramakrishnan