Bioinformatics researchers need efficient means to process large collections of sequence data. One application of interest, genome assembly, has great potential for parallelizati...
Christopher Moretti, Michael Olson, Scott J. Emric...
Background: Whole genome shotgun sequencing produces increasingly higher coverage of a genome with random sequence reads. Progressive whole genome assembly and eventual finishing ...
Qunfeng Dong, Matthew D. Wilkerson, Volker Brendel
Theoretically and empirically it is clear that a genetic algorithm with crossover will outperform a genetic algorithm without crossover in some fitness landscapes, and vice versa i...
Abstract. This paper presents the concept of parallelisation of a solver for Answer Set Programming (ASP). While there already exist some approaches to parallel ASP solving, there ...
Lars Schneidenbach, Bettina Schnor, Martin Gebser,...
Abstract— In this paper, we propose a sub-operation parallelism optimization algorithm in SIMD processor synthesis. Given an initial assembly code and timing constraints, our alg...