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» Parallelism in Structured Newton Computations
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SIAMSC
2011
140views more  SIAMSC 2011»
12 years 10 months ago
A Fast Parallel Algorithm for Selected Inversion of Structured Sparse Matrices with Application to 2D Electronic Structure Calcu
Abstract. An efficient parallel algorithm is presented and tested for computing selected components of H−1 where H has the structure of a Hamiltonian matrix of two-dimensional la...
Lin Lin, Chao Yang, Jianfeng Lu, Lexing Ying, Wein...
IPPS
1996
IEEE
13 years 11 months ago
Commutativity Analysis: A Technique for Automatically Parallelizing Pointer-Based Computations
This paper introduces an analysis technique, commutativity analysis, for automatically parallelizing computations that manipulate dynamic, pointer-based data structures. Commutati...
Martin C. Rinard, Pedro C. Diniz
ISCAPDCS
2007
13 years 9 months ago
Architectural requirements of parallel computational biology applications with explicit instruction level parallelism
—The tremendous growth in the information culture, efficient digital searches are needed to extract and identify information from huge data. The notion that evolution in silicon ...
Naeem Zafar Azeemi
BMCBI
2010
175views more  BMCBI 2010»
13 years 7 months ago
Towards high performance computing for molecular structure prediction using IBM Cell Broadband Engine - an implementation perspe
Background: RNA structure prediction problem is a computationally complex task, especially with pseudo-knots. The problem is well-studied in existing literature and predominantly ...
S. P. T. Krishnan, Sim Sze Liang, Bharadwaj Veerav...