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» Parallelization of GSL: Performance of Case Studies
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2003
IEEE
14 years 20 days ago
A Case Study of Parallel I/O for Biological Sequence Search on Linux Clusters
In this paper we analyze the I/O access patterns of a widely-used biological sequence search tool and implement two variations that employ parallel-I/O for data access based on PV...
Yifeng Zhu, Hong Jiang, Xiao Qin, David R. Swanson
IPPS
2003
IEEE
14 years 20 days ago
A Case Study of Optimistic Computing on the Grid: Parallel Mesh Generation
This paper describes our progress in creating a case study on optimistic computing for the Grid using parallel mesh generation. For the implementation of both methods we will be u...
Nikos Chrisochoides, Andriy Fedorov, Bruce Lowekam...
IPPS
2008
IEEE
14 years 1 months ago
Model-guided performance tuning of parameter values: A case study with molecular dynamics visualization
In this paper, we consider the interaction between application programmers and tools that automatically search a space of application-level parameters that are believed to impact ...
Yiinju L. Nelson, Bhupesh Bansal, Mary W. Hall, Ai...
IPPS
2000
IEEE
13 years 11 months ago
Predicting Performance on SMPs. A Case Study: The SGI Power Challenge
We study the issue of performance prediction on the SGIPower Challenge, a typical SMP. On such a platform, the cost of memory accesses depends on their locality and on contention ...
Nancy M. Amato, Jack Perdue, Mark M. Mathis, Andre...
IPPS
1998
IEEE
13 years 11 months ago
Airshed Pollution Modeling: A Case Study in Application Development in an HPF Environment
In this paper, we describe our experience with developing Airshed, a large pollution modeling application, in the Fx programming environment. We demonstrate that high level parall...
Jaspal Subhlok, Peter Steenkiste, James M. Stichno...