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BMCBI
2008
103views more  BMCBI 2008»
13 years 9 months ago
TOPS++FATCAT: Fast flexible structural alignment using constraints derived from TOPS+ Strings Model
Background: Protein structure analysis and comparison are major challenges in structural bioinformatics. Despite the existence of many tools and algorithms, very few of them have ...
Mallika Veeramalai, Yuzhen Ye, Adam Godzik
ISPAN
2005
IEEE
14 years 2 months ago
Using Predictive Adaptive Parallelism to Address Portability and Irregularity
A semi-dynamic system is presented that is capable of predicting the performance of parallel programs at runtime. The functionality given by the system allows for efficient handl...
David Wangerin, Isaac D. Scherson