Phylogenetic trees are commonly reconstructed based on hard optimization problems such as Maximum parsimony (MP) and Maximum likelihood (ML). Conventional MP heuristics for produc...
Anupam Bhattacharjee, Kazi Zakia Sultana, Zalia Sh...
In order to gain insight into multivariate data, complex structures must be analysed and understood. Parallel coordinates is an excellent tool for visualizing this type of data bu...
Jimmy Johansson, Patric Ljung, Mikael Jern, Matthe...
This paper presents program transformations directed toward improving communication-computation overlap in parallel programs that use MPI’s collective operations. Our transforma...
Anthony Danalis, Ki-Yong Kim, Lori L. Pollock, D. ...
A style for programming problems from matrix algebra is developed with a familiar example and new tools, yielding high performance with a couple of surprising exceptions. The under...
David S. Wise, Craig Citro, Joshua Hursey, Fang Li...
We examine the problem of retrieving the top-m ranked items from a large collection, randomly distributed across an n-node system. In order to retrieve the top m overall, we must ...