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BMCBI
2010
161views more  BMCBI 2010»
13 years 7 months ago
BPDA - A Bayesian peptide detection algorithm for mass spectrometry
Background: Mass spectrometry (MS) is an essential analytical tool in proteomics. Many existing algorithms for peptide detection are based on isotope template matching and usually...
Youting Sun, Jianqiu Zhang, Ulisses Braga-Neto, Ed...
BMCBI
2008
159views more  BMCBI 2008»
13 years 7 months ago
Multivariate hierarchical Bayesian model for differential gene expression analysis in microarray experiments
Background: Identification of differentially expressed genes is a typical objective when analyzing gene expression data. Recently, Bayesian hierarchical models have become increas...
Hongya Zhao, Kwok-Leung Chan, Lee-Ming Cheng, Hong...
FOCM
2008
100views more  FOCM 2008»
13 years 7 months ago
A Unifying Local Convergence Result for Newton's Method in Riemannian Manifolds
We consider the problem of finding a singularity of a differentiable vector field X defined on a complete Riemannian manifold. We prove a unified result for the existence and local...
Felipe Alvarez, Jérôme Bolte, Julien ...
CAGD
2006
114views more  CAGD 2006»
13 years 7 months ago
Jet subdivision schemes on the k-regular complex
We introduce a new family of subdivision schemes called jet subdivision schemes. Jet subdivision schemes are a natural generalization of the commonly used subdivision schemes for ...
Yonggang Xue, Thomas P.-Y. Yu, Tom Duchamp
BMCBI
2007
115views more  BMCBI 2007»
13 years 7 months ago
Recognizing protein-protein interfaces with empirical potentials and reduced amino acid alphabets
Background: In structural genomics, an important goal is the detection and classification of protein–protein interactions, given the structures of the interacting partners. We h...
Guillaume Launay, Raul Mendez, Shoshana J. Wodak, ...