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CJ
2008
90views more  CJ 2008»
13 years 8 months ago
Parameterized Complexity and Biopolymer Sequence Comparison
The article surveys parameterized algorithms and complexities for computational tasks on biopolymer sequences, including the problems of longest common subsequence, shortest commo...
Liming Cai, Xiuzhen Huang, Chunmei Liu, Frances A....
WDAG
2007
Springer
92views Algorithms» more  WDAG 2007»
14 years 2 months ago
Self-stabilizing Counting in Mobile Sensor Networks with a Base Station
Abstract. Distributed computing must adapt its techniques to networks of mobile agents. Indeed, we are facing new problems like the small size of memory and the lack of computation...
Joffroy Beauquier, Julien Clement, Stéphane...
AAAI
2007
13 years 11 months ago
Approximate Counting by Sampling the Backtrack-free Search Space
We present a new estimator for counting the number of solutions of a Boolean satisfiability problem as a part of an importance sampling framework. The estimator uses the recently...
Vibhav Gogate, Rina Dechter
STOC
2005
ACM
167views Algorithms» more  STOC 2005»
14 years 9 months ago
Approximately counting integral flows and cell-bounded contingency tables
We consider the problem of approximately counting integral flows in a network. We show that there is an fpras based on volume estimation if all capacities are sufficiently large, ...
Mary Cryan, Martin E. Dyer, Dana Randall
RECOMB
2006
Springer
14 years 9 months ago
A Parameterized Algorithm for Protein Structure Alignment
This paper proposes a parameterized algorithm for aligning two protein structures, in the case where one protein structure is represented by a contact map graph and the other by a ...
Jinbo Xu, Feng Jiao, Bonnie Berger