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EKAW
2006
Springer
13 years 11 months ago
Capturing Quantified Constraints in FOL, Through Interaction with a Relationship Graph
As new semantic web standards evolve to allow quantified rules in FOL, we need new ways to capture them from end users. We show how to do this against a graphic view of entities an...
Peter M. D. Gray, Graham J. L. Kemp
BMCBI
2010
145views more  BMCBI 2010»
13 years 7 months ago
JCoDA: a tool for detecting evolutionary selection
Background: The incorporation of annotated sequence information from multiple related species in commonly used databases (Ensembl, Flybase, Saccharomyces Genome Database, Wormbase...
Steven N. Steinway, Ruth Dannenfelser, Christopher...
CGF
2008
142views more  CGF 2008»
13 years 7 months ago
Visualizing Genome Expression and Regulatory Network Dynamics in Genomic and Metabolic Context
DNA microarrays are used to measure the expression levels of thousands of genes simultaneously. In a time series experiment, the gene expressions are measured as a function of tim...
Michel A. Westenberg, Sacha A. F. T. van Hijum, Os...
TVCG
2008
121views more  TVCG 2008»
13 years 7 months ago
On the Visualization of Social and other Scale-Free Networks
This paper proposes novel methods for visualizing specifically the large power-law graphs that arise in sociology and the sciences. In such cases a large portion of edges can be sh...
Yuntao Jia, Jared Hoberock, Michael Garland, John ...
BMCBI
2007
147views more  BMCBI 2007»
13 years 7 months ago
Modeling biochemical transformation processes and information processing with Narrator
Background: Software tools that model and simulate the dynamics of biological processes and systems are becoming increasingly important. Some of these tools offer sophisticated gr...
Johannes J. Mandel, Hendrik Fuß, Niall M. Pa...