76 search results - page 4 / 16 » Pattern Matching in Degenerate DNA RNA Sequences |
JIB
2006
13 years 7 months ago
2006
In this study, we seek to develop a predictive model for finding the strength of binding between a particular transcription factor (TF) variant and a particular DNA target variant...
BMCBI
2005
13 years 7 months ago
2005
Background: Comparison of data produced on different microarray platforms often shows surprising discordance. It is not clear whether this discrepancy is caused by noisy data or b...
BMCBI
2007
13 years 7 months ago
2007
Background: Computational methods to predict transcription factor binding sites (TFBS) based on exhaustive algorithms are guaranteed to find the best patterns but are often limite...
CSB
2002
IEEE
14 years 13 days ago
2002
IEEE
-- We investigate off-line dictionary oriented approaches to DNA sequence compression, based on the Burrows-Wheeler Transform (BWT). The preponderance of short repeating patterns i...
BMCBI
2010
13 years 2 months ago
2010
Background: The brightness of the probe spots on expression microarrays intends to measure the abundance of specific mRNA targets. Probes with runs of at least three guanines (G) ...