Background: The Monte Carlo simulation of sequence evolution is routinely used to assess the performance of phylogenetic inference methods and sequence alignment algorithms. Progr...
Botond Sipos, Tim Massingham, Gregory E. Jordan, N...
The problem of characterizing and detecting recurrent sequence patterns such as substrings or motifs and related associations or rules is variously pursued in order to compress da...
Alberto Apostolico, Mary Ellen Bock, Stefano Lonar...
The paper describes a lexicon driven approach for word recognition on handwritten documents using Conditional Random Fields(CRFs). CRFs are discriminative models and do not make a...
Shravya Shetty, Harish Srinivasan, Sargur N. Sriha...
We present a method for inferring the topology of a sensor network given nondiscriminating observations of activity in the monitored region. This is accomplished based on no prior ...
Background: Discovering approximately repeated patterns, or motifs, in biological sequences is an important and widely-studied problem in computational molecular biology. Most fre...