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CODES
2005
IEEE
14 years 2 months ago
Blue matter on blue gene/L: massively parallel computation for biomolecular simulation
This paper provides an overview of the Blue Matter application development effort within the Blue Gene project that supports our scientific simulation efforts in the areas of pro...
Robert S. Germain, Blake G. Fitch, Aleksandr Raysh...
PLDI
2003
ACM
14 years 1 months ago
Compile-time dynamic voltage scaling settings: opportunities and limits
With power-related concerns becoming dominant aspects of hardware and software design, significant research effort has been devoted towards system power minimization. Among run-t...
Fen Xie, Margaret Martonosi, Sharad Malik
MASCOTS
2008
13 years 10 months ago
Optimizing Galois Field Arithmetic for Diverse Processor Architectures and Applications
Galois field implementations are central to the design of many reliable and secure systems, with many systems implementing them in software. The two most common Galois field opera...
Kevin M. Greenan, Ethan L. Miller, Thomas J. E. Sc...
BMCBI
2010
82views more  BMCBI 2010»
13 years 8 months ago
SolexaQA: At-a-glance quality assessment of Illumina second-generation sequencing data
Background: Illumina's second-generation sequencing platform is playing an increasingly prominent role in modern DNA and RNA sequencing efforts. However, rapid, simple, stand...
Murray P. Cox, Daniel A. Peterson, Patrick J. Bigg...
TPDS
2010
174views more  TPDS 2010»
13 years 7 months ago
Parallel Two-Sided Matrix Reduction to Band Bidiagonal Form on Multicore Architectures
The objective of this paper is to extend, in the context of multicore architectures, the concepts of tile algorithms [Buttari et al., 2007] for Cholesky, LU, QR factorizations to t...
Hatem Ltaief, Jakub Kurzak, Jack Dongarra
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