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» Patterns for decoupling data structures and algorithms
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CBMS
2006
IEEE
14 years 1 months ago
MS2DB: An Algorithmic Approach to Determine Disulfide Linkage Patterns
Determining the number and location of disulfide bonds within a protein provide valuable insight into the protein’s three-dimensional structure. Purely computational methods tha...
Timothy Lee, Rahul Singh, Ten-Yang Yen, Bruce Mach...
GD
1998
Springer
13 years 11 months ago
Algorithmic Patterns for Orthogonal Graph Drawing
Abstract. In this paper, we present an object-oriented design and implementation of the core steps of the giotto algorithm for orthogonal graph drawing. Our design is motivated by ...
Natasha Gelfand, Roberto Tamassia
WWW
2007
ACM
14 years 8 months ago
Wherefore art thou r3579x?: anonymized social networks, hidden patterns, and structural steganography
In a social network, nodes correspond to people or other social entities, and edges correspond to social links between them. In an effort to preserve privacy, the practice of anon...
Lars Backstrom, Cynthia Dwork, Jon M. Kleinberg
SSPR
2004
Springer
14 years 24 days ago
Kernel Methods for Exploratory Pattern Analysis: A Demonstration on Text Data
Kernel Methods are a class of algorithms for pattern analysis with a number of convenient features. They can deal in a uniform way with a multitude of data types and can be used to...
Tijl De Bie, Nello Cristianini
RECOMB
2002
Springer
14 years 7 months ago
Phase-independent rhythmic analysis of genome-wide expression patterns
We introduce a model-based analysis technique for extracting and characterizing rhythmic expression pro les from genome-wide DNA microarray hybridization data. These patterns are ...
Christopher James Langmead, Anthony K. Yan, C. Rob...