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CAV
2006
Springer
95views Hardware» more  CAV 2006»
15 years 9 months ago
Yasm: A Software Model-Checker for Verification and Refutation
Example Guided Abstraction Refinement (CEGAR) [6] framework. A number of wellengineered software model-checkers are available, e.g., SLAM [1] and BLAST [12]. Why build another one?...
Arie Gurfinkel, Ou Wei, Marsha Chechik
AB
2008
Springer
15 years 12 months ago
An Algorithm for Qualitative Simulation of Gene Regulatory Networks with Steep Sigmoidal Response Functions
A specific class of ODEs has been shown to be adequate to describe the essential features of the complex dynamics of Gene-Regulatory Networks (GRN). But, the effective exploitatio...
Liliana Ironi, Luigi Panzeri, Erik Plahte
FGCS
2010
186views more  FGCS 2010»
15 years 4 months ago
A grid portal for solving geoscience problems using distributed knowledge discovery services
This paper describes our research effort to employ Grid technologies to enable the development of geoscience applications by integrating workflow technologies with data mining r...
Gianluigi Folino, Agostino Forestiero, Giuseppe Pa...
PLDI
2010
ACM
16 years 3 months ago
A Context-free Markup Language for Semi-structured Text
An ad hoc data format is any non-standard, semi-structured data format for which robust data processing tools are not available. In this paper, we present ANNE, a new kind of mark...
Qian Xi, David Walker
BMCBI
2007
139views more  BMCBI 2007»
15 years 5 months ago
XSTREAM: A practical algorithm for identification and architecture modeling of tandem repeats in protein sequences
Background: Biological sequence repeats arranged in tandem patterns are widespread in DNA and proteins. While many software tools have been designed to detect DNA tandem repeats (...
Aaron M. Newman, James B. Cooper