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BMCBI
2005
143views more  BMCBI 2005»
13 years 8 months ago
Gene capture prediction and overlap estimation in EST sequencing from one or multiple libraries
Background: In expressed sequence tag (EST) sequencing, we are often interested in how many genes we can capture in an EST sample of a targeted size. This information provides ins...
Ji-Ping Z. Wang, Bruce G. Lindsay 0002, Liying Cui...
PVM
1998
Springer
14 years 25 days ago
Implementing MPI with the Memory-Based Communication Facilities on the SSS-CORE Operating System
This paper describes an e cient implementation of MPI on the Memory-Based Communication Facilities; Memory-Based FIFO is used for bu ering by the library, and Remote Write for comm...
Kenji Morimoto, Takashi Matsumoto, Kei Hiraki
CCGRID
2010
IEEE
13 years 9 months ago
A High-Level Interpreted MPI Library for Parallel Computing in Volunteer Environments
Idle desktops have been successfully used to run sequential and master-slave task parallel codes on a large scale in the context of volunteer computing. However, execution of messa...
Troy P. LeBlanc, Jaspal Subhlok, Edgar Gabriel
FCCM
2007
IEEE
115views VLSI» more  FCCM 2007»
14 years 2 months ago
Generating FPGA-Accelerated DFT Libraries
We present a domain-specific approach to generate highperformance hardware-software partitioned implementations of the discrete Fourier transform (DFT) in fixed point precision....
Paolo D'Alberto, Peter A. Milder, Aliaksei Sandryh...
TCAD
2008
103views more  TCAD 2008»
13 years 8 months ago
Topology-Based Performance Analysis and Optimization of Latency-Insensitive Systems
Latency-insensitive protocols allow system-on-chip (SoC) engineers to decouple the design of the computing cores from the design of the intercore communication channels while follo...
Rebecca L. Collins, Luca P. Carloni