685 search results - page 27 / 137 » Performance of Runtime Optimization on BLAST |
IPPS
2006
IEEE
14 years 2 months ago
2006
IEEE
UPC’s implicit communication and fine-grain programming style make application performance modeling a challenging task. The correspondence between remote references and communi...
GECCO
2010
Springer
14 years 1 months ago
2010
Springer
This paper presents results of the BBOB-2009 benchmarking of 31 search algorithms on 24 noiseless functions in a black-box optimization scenario in continuous domain. The runtime ...
RECOMB
2003
Springer
14 years 9 months ago
2003
Springer
Large-scale comparison of genomic DNA is of fundamental importance in annotating functional elements of genomes. To perform large comparisons efficiently, BLAST (Methods: Companio...
CSB
2004
IEEE
14 years 15 days ago
2004
IEEE
We describe a novel hardware architecture for genomic and proteomic sequence alignment which achieves a speed-up of two to three orders of magnitude over Smith-Waterman dynamic pr...
RECONFIG
2009
IEEE
14 years 3 months ago
2009
IEEE
BLASTn is a ubiquitous tool used for large scale DNA analysis. Detailed profiling tests reveal that the most computationally intensive sections of the BLASTn algorithm are the sc...