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BIOCOMP
2009
13 years 11 months ago
Improving Remote Homology Detection Using Sequence Properties and Position Specific Scoring Matrices
Current biological sequence comparison tools frequently fail to recognize matches between homologs when sequence similarity is below the twilight zone of less than 25% sequence id...
Gina Cooper, Michael L. Raymer
BIOINFORMATICS
2005
85views more  BIOINFORMATICS 2005»
13 years 10 months ago
An automated genotyping system for analysis of HIV-1 and other microbial sequences
Motivation: Genetic analysis of HIV-1 is important not only for vaccine development, but also to guide treatment strategies, track the emergence of new viral variants and ensure t...
Tulio de Oliveira, Koen Deforche, Sharon Cassol, M...
RECOMB
2011
Springer
13 years 1 months ago
Haplotype Reconstruction in Large Pedigrees with Many Untyped Individuals
Abstract. Haplotypes, as they specify the linkage patterns between dispersed genetic variations, provide important information for understanding the genetics of human traits. Howev...
Xin Li, Jing Li
ICSM
2006
IEEE
14 years 4 months ago
Allowing Overlapping Boundaries in Source Code using a Search Based Approach to Concept Binding
One approach to supporting program comprehension involves binding concepts to source code. Previously proposed approaches to concept binding have enforced nonoverlapping boundarie...
Nicolas Gold, Mark Harman, Zheng Li, Kiarash Mahda...
ENTCS
2006
113views more  ENTCS 2006»
13 years 10 months ago
Concurrent Java Test Generation as a Search Problem
A Random test generator generates executable tests together with their expected results. In the form of a noise-maker, it seeds the program with conditional scheduling primitives ...
Yaniv Eytani