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BMCBI
2007
133views more  BMCBI 2007»
13 years 8 months ago
Semantic integration to identify overlapping functional modules in protein interaction networks
Background: The systematic analysis of protein-protein interactions can enable a better understanding of cellular organization, processes and functions. Functional modules can be ...
Young-Rae Cho, Woochang Hwang, Murali Ramanathan, ...
BMCBI
2010
161views more  BMCBI 2010»
13 years 8 months ago
BPDA - A Bayesian peptide detection algorithm for mass spectrometry
Background: Mass spectrometry (MS) is an essential analytical tool in proteomics. Many existing algorithms for peptide detection are based on isotope template matching and usually...
Youting Sun, Jianqiu Zhang, Ulisses Braga-Neto, Ed...
BMCBI
2008
100views more  BMCBI 2008»
13 years 8 months ago
PatternLab for proteomics: a tool for differential shotgun proteomics
Background: A goal of proteomics is to distinguish between states of a biological system by identifying protein expression differences. Liu et al. demonstrated a method to perform...
Paulo C. Carvalho, Juliana S. G. Fischer, Emily I....
ENVSOFT
2008
55views more  ENVSOFT 2008»
13 years 8 months ago
A simple algorithm for yield estimates: Evaluation for semi-arid irrigated winter wheat monitored with green leaf area index
In this study we investigated the perspective offered by coupling a simple vegetation growth model and ground-based remotely-sensed data for the monitoring of wheat production. A ...
Benoît Duchemin, Philippe Maisongrande, Gill...
BMCBI
2006
172views more  BMCBI 2006»
13 years 8 months ago
BioWarehouse: a bioinformatics database warehouse toolkit
Background: This article addresses the problem of interoperation of heterogeneous bioinformatics databases. Results: We introduce BioWarehouse, an open source toolkit for construc...
Thomas J. Lee, Yannick Pouliot, Valerie Wagner, Pr...