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RTAS
2008
IEEE
14 years 4 months ago
Physical Assembly Mapper: A Model-Driven Optimization Tool for QoS-Enabled Component Middleware
This paper provides four contributions to the study of optimization techniques for component-based distributed realtime and embedded (DRE) systems. First, we describe key challeng...
Krishnakumar Balasubramanian, Douglas C. Schmidt
DFT
2006
IEEE
99views VLSI» more  DFT 2006»
14 years 3 months ago
Error Tolerance of DNA Self-Assembly by Monomer Concentration Control
Abstract— This paper proposes the control of monomer concentration as a novel improvement of the kinetic Tile Assembly Model (kTAM) to reduce the error rate in DNA selfassembly. ...
Byunghyun Jang, Yong-Bin Kim, Fabrizio Lombardi
CORR
2007
Springer
81views Education» more  CORR 2007»
13 years 9 months ago
Faster exon assembly by sparse spliced alignment
Assembling a gene from candidate exons is an important problem in computational biology. Among the most successful approaches to this problem is spliced alignment, proposed by Gelf...
Alexandre Tiskin
OOPSLA
2010
Springer
13 years 8 months ago
Component adaptation and assembly using interface relations
Software’s expense owes partly to frequent reimplementation of similar functionality and partly to maintenance of patches, ports or components targeting evolving interfaces. Mor...
Stephen Kell
BMCBI
2010
161views more  BMCBI 2010»
13 years 7 months ago
LTC: a novel algorithm to improve the efficiency of contig assembly for physical mapping in complex genomes
Background: Physical maps are the substrate of genome sequencing and map-based cloning and their construction relies on the accurate assembly of BAC clones into large contigs that...
Zeev Frenkel, Etienne Paux, David I. Mester, Cathe...