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» Physics-based simulation of biological structures
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WSC
2000
13 years 9 months ago
Medical education as a model for simulation education
Simulation professionals need to see themselves first as systems analysts, i.e., problem solvers, rather than just simulation users. As the networked digital economy develops, sys...
Andrew F. Seila
BMCBI
2011
12 years 11 months ago
Learning sparse models for a dynamic Bayesian network classifier of protein secondary structure
Background: Protein secondary structure prediction provides insight into protein function and is a valuable preliminary step for predicting the 3D structure of a protein. Dynamic ...
Zafer Aydin, Ajit Singh, Jeff Bilmes, William Staf...
TCS
2008
13 years 7 months ago
On the decidability and complexity of the structural congruence for beta-binders
Beta-binders is a recent process calculus developed for modelling and simulating biological systems. As usual for process calculi, the semantic definition heavily relies on a stru...
Alessandro Romanel, Corrado Priami
ENTCS
2010
97views more  ENTCS 2010»
13 years 5 months ago
A Framework for Modelling and Simulating Networks of Cells
Several complex biological phenomena are to be modelled in terms of a large and dynamic network of compartments, where the interplay between inter-compartment and intra-compartmen...
Sara Montagna, Mirko Viroli
BMCBI
2010
126views more  BMCBI 2010»
13 years 7 months ago
Simulation of a Petri net-based Model of the Terpenoid Biosynthesis Pathway
Background: The development and simulation of dynamic models of terpenoid biosynthesis has yielded a systems perspective that provides new insights into how the structure of this ...
Aliah Hazmah Hawari, Zeti-Azura Mohamed-Hussein