Sciweavers

168 search results - page 12 / 34
» Physics-based simulation of biological structures
Sort
View
ECCB
2002
IEEE
14 years 17 days ago
Stochastic roadmap simulation for the study of ligand-protein interactions
The dynamics of ligand-protein interactions are necessary to understand for the design of novel therapeutic agents. In this paper, we establish the use of Stochastic Roadmap Simul...
Mehmet Serkan Apaydin, Carlos Guestrin, Chris Varm...
ICANN
2007
Springer
14 years 1 months ago
SpikeStream: A Fast and Flexible Simulator of Spiking Neural Networks
SpikeStream is a new simulator of biologically structured spiking neural networks that can be used to edit, display and simulate up to 100,000 neurons. This simulator uses a combin...
David Gamez
HPCS
2007
IEEE
14 years 1 months ago
Utilizing Averaged Configuations from Molecular Dynamics Simulation Trajectories
One of the challenges in the large-scale simulations required for many molecular systems (such as those of biological interested) is the recording, monitoring and visualization of...
Peter G. Kusalik, K. Gillis, J. Vatamanu
BIBE
2007
IEEE
110views Bioinformatics» more  BIBE 2007»
14 years 2 months ago
Toward Petascale Simulation of Cellular Microphysiology
Abstract-MCell is a Monte Carlo simulator of cell microphysiology, and the scalable variant can be used to study challenging problems of interest to the biological community. MCell...
Scott B. Baden, Terrence J. Sejnowski, Thomas M. B...
ICML
2009
IEEE
14 years 8 months ago
Learning structurally consistent undirected probabilistic graphical models
In many real-world domains, undirected graphical models such as Markov random fields provide a more natural representation of the dependency structure than directed graphical mode...
Sushmita Roy, Terran Lane, Margaret Werner-Washbur...