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» Physics-based simulation of biological structures
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INFORMATICALT
2008
120views more  INFORMATICALT 2008»
13 years 7 months ago
Nonlinear Behaviour in the MPI-Parallelised Model of the Rat Somatosensory Cortex
Mammalian brains consisting of up to 1011 neurons belong to group of the most complex systems in the Universe. For years they have been one of the hardest objects of simulation. Th...
Grzegorz M. Wojcik, Wieslaw A. Kaminski
AFRIGRAPH
2010
ACM
13 years 11 months ago
Visualization of solution sets from automated docking of molecular structures
Aligning structures, often referred to as docking or registration, is frequently required in fields such as computer science, robotics and structural biology. The task of alignin...
Johannes Jansen van Vuuren, Michelle Kuttel, James...
BMCBI
2007
117views more  BMCBI 2007»
13 years 7 months ago
Influence of degree correlations on network structure and stability in protein-protein interaction networks
Background: The existence of negative correlations between degrees of interacting proteins is being discussed since such negative degree correlations were found for the large-scal...
Caroline C. Friedel, Ralf Zimmer
GECCO
2005
Springer
149views Optimization» more  GECCO 2005»
14 years 1 months ago
There's more to a model than code: understanding and formalizing in silico modeling experience
Mapping biology into computation has both a domain specific aspect – biological theory – and a methodological aspect – model development. Computational modelers have implici...
Janet Wiles, Nicholas Geard, James Watson, Kai Wil...
BMCBI
2010
178views more  BMCBI 2010»
13 years 7 months ago
Applications of a formal approach to decipher discrete genetic networks
Background: A growing demand for tools to assist the building and analysis of biological networks exists in systems biology. We argue that the use of a formal approach is relevant...
Fabien Corblin, Eric Fanchon, Laurent Trilling