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BMCBI
2006
127views more  BMCBI 2006»
13 years 7 months ago
Using local gene expression similarities to discover regulatory binding site modules
Background: We present an approach designed to identify gene regulation patterns using sequence and expression data collected for Saccharomyces cerevisae. Our main goal is to rela...
Bartek Wilczynski, Torgeir R. Hvidsten, Andriy Kry...
BMCBI
2007
112views more  BMCBI 2007»
13 years 7 months ago
Selecting dissimilar genes for multi-class classification, an application in cancer subtyping
Background: Gene expression microarray is a powerful technology for genetic profiling diseases and their associated treatments. Such a process involves a key step of biomarker ide...
Zhipeng Cai, Randy Goebel, Mohammad R. Salavatipou...
IPPS
2009
IEEE
14 years 2 months ago
Ibis: Real-world problem solving using real-world grids
Ibis is an open source software framework that drastically simplifies the process of programming and deploying large-scale parallel and distributed grid applications. Ibis suppor...
Henri E. Bal, Niels Drost, Roelof Kemp, Jason Maas...
DILS
2009
Springer
14 years 2 months ago
Integration of Full-Coverage Probabilistic Functional Networks with Relevance to Specific Biological Processes
Probabilistic functional integrated networks are powerful tools with which to draw inferences from high-throughput data. However, network analyses are generally not tailored to spe...
Katherine James, Anil Wipat, Jennifer Hallinan
ICPADS
2006
IEEE
14 years 1 months ago
Acceleration of Maximum Likelihood Estimation for Tomosynthesis Mammography
Maximum likelihood (ML) estimation is used during tomosynthesis mammography reconstruction. A single reconstruction involves the processing of highresolution projection images, wh...
Juemin Zhang, Waleed Meleis, David R. Kaeli, Tao W...