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BMCBI
2006
142views more  BMCBI 2006»
13 years 7 months ago
Improving the Performance of SVM-RFE to Select Genes in Microarray Data
Background: Recursive Feature Elimination is a common and well-studied method for reducing the number of attributes used for further analysis or development of prediction models. ...
Yuanyuan Ding, Dawn Wilkins
RECOMB
2004
Springer
14 years 8 months ago
Mining protein family specific residue packing patterns from protein structure graphs
Finding recurring residue packing patterns, or spatial motifs, that characterize protein structural families is an important problem in bioinformatics. To this end, we apply a nov...
Jun Huan, Wei Wang 0010, Deepak Bandyopadhyay, Jac...
BMCBI
2010
227views more  BMCBI 2010»
13 years 7 months ago
Accurate and efficient gp120 V3 loop structure based models for the determination of HIV-1 co-receptor usage
Background: HIV-1 targets human cells expressing both the CD4 receptor, which binds the viral envelope glycoprotein gp120, as well as either the CCR5 (R5) or CXCR4 (X4) co-recepto...
Majid Masso, Iosif I. Vaisman
SBACPAD
2005
IEEE
110views Hardware» more  SBACPAD 2005»
14 years 1 months ago
Portable checkpointing and communication for BSP applications on dynamic heterogeneous Grid environments
Executing long-running parallel applications in Opportunistic Grid environments composed of heterogeneous, shared user workstations, is a daunting task. Machines may fail, become ...
Raphael Y. de Camargo, Fabio Kon, Alfredo Goldman
CLUSTER
2009
IEEE
13 years 11 months ago
Analytical modeling and optimization for affinity based thread scheduling on multicore systems
Abstract--This paper proposes an analytical model to estimate the cost of running an affinity-based thread schedule on multicore systems. The model consists of three submodels to e...
Fengguang Song, Shirley Moore, Jack Dongarra