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    BMCBI
    2007
    169views more  BMCBI 2007»
    Transcription factor target prediction using multiple short expression time series from Arabidopsis thaliana
    13 years 7 months ago
    Transcription factor target prediction using multiple short expression time series from Arabidopsis thaliana
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    Background: The central role of transcription factors (TFs) in higher eukaryotes has led to much interest in deciphering transcriptional regulatory interactions. Even in the best ...
    Henning Redestig, Daniel Weicht, Joachim Selbig, M...
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    BIOCOMP
    2008
    146views Bioinformatics» more  BIOCOMP 2008»
    Reverse Engineering Module Networks by PSO-RNN Hybrid Modeling
    13 years 9 months ago
    Reverse Engineering Module Networks by PSO-RNN Hybrid Modeling
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    Background: Inferring a gene regulatory network (GRN) from high throughput biological data is often an under-determined problem and is a challenging task due to the following reas...
    Yuji Zhang, Jianhua Xuan, Benildo de los Reyes, Ro...
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    BIOINFORMATICS
    2007
    195views more  BIOINFORMATICS 2007»
    Context-dependent clustering for dynamic cellular state modeling of microarray gene expression
    13 years 7 months ago
    Context-dependent clustering for dynamic cellular state modeling of microarray gene expression
    Download  www.stat.ucla.edu
    Motivation: High-throughput expression profiling allows researchers to study gene activities globally. Genes with similar expression profiles are likely to encode proteins that ma...
    Shinsheng Yuan, Ker-Chau Li
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    BMCBI
    2007
    207views more  BMCBI 2007»
    Analyzing in situ gene expression in the mouse brain with image registration, feature extraction and block clustering
    13 years 7 months ago
    Analyzing in situ gene expression in the mouse brain with image registration, feature extraction and block clustering
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    Background: Many important high throughput projects use in situ hybridization and may require the analysis of images of spatial cross sections of organisms taken with cellular lev...
    Manjunatha Jagalur, Chris Pal, Erik G. Learned-Mil...
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    BMCBI
    2007
    168views more  BMCBI 2007»
    GOSim - an R-package for computation of information theoretic GO similarities between terms and gene products
    13 years 7 months ago
    GOSim - an R-package for computation of information theoretic GO similarities between terms and gene products
    Download  www.biomedcentral.com
    Background: With the increased availability of high throughput data, such as DNA microarray data, researchers are capable of producing large amounts of biological data. During the...
    Holger Fröhlich, Nora Speer, Annemarie Poustk...
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