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BMCBI
2011
14 years 9 months ago
Multithreaded comparative RNA secondary structure prediction using stochastic context-free grammars
Background: The prediction of the structure of large RNAs remains a particular challenge in bioinformatics, due to the computational complexity and low levels of accuracy of state...
Zsuzsanna Sukosd, Bjarne Knudsen, Morten Vaerum, J...
155
Voted
BMCBI
2010
175views more  BMCBI 2010»
15 years 2 months ago
Towards high performance computing for molecular structure prediction using IBM Cell Broadband Engine - an implementation perspe
Background: RNA structure prediction problem is a computationally complex task, especially with pseudo-knots. The problem is well-studied in existing literature and predominantly ...
S. P. T. Krishnan, Sim Sze Liang, Bharadwaj Veerav...
167
Voted
BMCBI
2004
167views more  BMCBI 2004»
15 years 2 months ago
Feature selection for splice site prediction: A new method using EDA-based feature ranking
Background: The identification of relevant biological features in large and complex datasets is an important step towards gaining insight in the processes underlying the data. Oth...
Yvan Saeys, Sven Degroeve, Dirk Aeyels, Pierre Rou...
108
Voted
DAC
2009
ACM
16 years 3 months ago
Energy-aware error control coding for Flash memories
The use of Flash memories in portable embedded systems is ever increasing. This is because of the multi-level storage capability that makes them excellent candidates for high dens...
Veera Papirla, Chaitali Chakrabarti
RTAS
2009
IEEE
15 years 9 months ago
The System-Level Simplex Architecture for Improved Real-Time Embedded System Safety
Embedded systems in safety-critical environments demand safety guarantees while providing many useful services that are too complex to formally verify or fully test. Existing appl...
Stanley Bak, Deepti K. Chivukula, Olugbemiga Adeku...