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» Predicting protein functions with message passing algorithms
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FMICS
2007
Springer
14 years 4 months ago
An Approach to Formalization and Analysis of Message Passing Libraries
Message passing using libraries implementing the Message Passing Interface (MPI) standard is the dominant communication mechanism in high performance computing (HPC) applications. ...
Robert Palmer, Michael Delisi, Ganesh Gopalakrishn...
HPDC
2010
IEEE
13 years 11 months ago
Modeling sequence and function similarity between proteins for protein functional annotation
A common task in biological research is to predict function for proteins by comparing sequences between proteins of known and unknown function. This is often done using pair-wise ...
Roger Higdon, Brenton Louie, Eugene Kolker
PDPTA
2003
13 years 11 months ago
Managing Flocking Objects with an Octree Spanning a Parallel Message-Passing Computer Cluster
We investigate the management of flocking mobile objects using a parallel message-passing computer cluster. An octree, a data structure well-known for use in managing a 3D space, ...
Thomas E. Portegys, Kevin M. Greenan
ECCV
2008
Springer
14 years 11 months ago
Efficiently Learning Random Fields for Stereo Vision with Sparse Message Passing
As richer models for stereo vision are constructed, there is a growing interest in learning model parameters. To estimate parameters in Markov Random Field (MRF) based stereo formu...
Jerod J. Weinman, Lam Tran, Christopher J. Pal
BMCBI
2007
119views more  BMCBI 2007»
13 years 9 months ago
Efficacy of different protein descriptors in predicting protein functional families
Background: Sequence-derived structural and physicochemical descriptors have frequently been used in machine learning prediction of protein functional families, thus there is a ne...
Serene A. K. Ong, Hong Huang Lin, Yu Zong Chen, Ze...