Knowing the number of residue contacts in a protein is crucial for deriving constraints useful in modeling protein folding, protein structure, and/or scoring remote homology searc...
— As the scale and complexity of parallel systems continue to grow, failures become more and more an inevitable fact for solving large-scale applications. In this research, we pr...
Abstract. Conventional performance environments are based on pro ling and event instrumentation. It becomes problematic as parallel systems scale to hundreds of nodes and beyond. A...
Xian-He Sun, Mario Pantano, Thomas Fahringer, Zhao...
In this paper, a comprehensive performance review of an MPI-based high-order three-dimensional spectral element method C++ toolbox is presented. The focus is put on the performance...
Christoph Bosshard, Roland Bouffanais, Christian C...
Multithreading has been proposed as an architectural strategy for tolerating latency in multiprocessors and, through limited empirical studies, shown to offer promise. This paper ...
Rafael H. Saavedra-Barrera, David E. Culler, Thors...