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BMCBI
2007
148views more  BMCBI 2007»
13 years 7 months ago
fREDUCE: Detection of degenerate regulatory elements using correlation with expression
Background: The precision of transcriptional regulation is made possible by the specificity of physical interactions between transcription factors and their cognate binding sites ...
Randy Z. Wu, Christina Chaivorapol, Jiashun Zheng,...
GECCO
2005
Springer
204views Optimization» more  GECCO 2005»
14 years 1 months ago
Modeling systems with internal state using evolino
Existing Recurrent Neural Networks (RNNs) are limited in their ability to model dynamical systems with nonlinearities and hidden internal states. Here we use our general framework...
Daan Wierstra, Faustino J. Gomez, Jürgen Schm...
BMCBI
2008
123views more  BMCBI 2008»
13 years 7 months ago
Validation of protein models by a neural network approach
Background: The development and improvement of reliable computational methods designed to evaluate the quality of protein models is relevant in the context of protein structure re...
Paolo Mereghetti, Maria Luisa Ganadu, Elena Papale...
BMCBI
2008
153views more  BMCBI 2008»
13 years 7 months ago
Improved general regression network for protein domain boundary prediction
Background: Protein domains present some of the most useful information that can be used to understand protein structure and functions. Recent research on protein domain boundary ...
Paul D. Yoo, Abdur R. Sikder, Bing Bing Zhou, Albe...
ESANN
2004
13 years 9 months ago
Neural networks for data mining: constrains and open problems
When we talk about using neural networks for data mining we have in mind the original data mining scope and challenge. How did neural networks meet this challenge? Can we run neura...
Razvan Andonie, Boris Kovalerchuk