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BIOINFORMATICS
2008
135views more  BIOINFORMATICS 2008»
13 years 7 months ago
Message-passing algorithms for the prediction of protein domain interactions from protein-protein interaction data
Motivation: Cellular processes often hinge upon specific interactions among proteins, and knowledge of these processes at a system level constitutes a major goal of proteomics. In...
Mudassar Iqbal, Alex Alves Freitas, Colin G. Johns...
RSCTC
2004
Springer
150views Fuzzy Logic» more  RSCTC 2004»
14 years 25 days ago
Extracting Protein-Protein Interaction Sentences by Applying Rough Set Data Analysis
illion abstracts. Problem. How to find sentences that talk about protein-protein interactions? Example (Non-Interaction Sentence) All our data are consistent with models in which ...
Filip Ginter, Tapio Pahikkala, Sampo Pyysalo, Jorm...
BIRD
2007
Springer
107views Bioinformatics» more  BIRD 2007»
14 years 1 months ago
Prediction of Structurally-Determined Coiled-Coil Domains with Hidden Markov Models
The coiled-coil protein domain is a widespread structural motif known to be involved in a wealth of key interactions in cells and organisms. Coiled-coil recognition and prediction ...
Piero Fariselli, Daniele Molinini, Rita Casadio, A...
BMCBI
2008
134views more  BMCBI 2008»
13 years 7 months ago
Prediction of protein-protein binding site by using core interface residue and support vector machine
Background: The prediction of protein-protein binding site can provide structural annotation to the protein interaction data from proteomics studies. This is very important for th...
Nan Li, Zhonghua Sun, Fan Jiang
RECOMB
2005
Springer
14 years 7 months ago
Towards an Integrated Protein-Protein Interaction Network
Abstract. Protein-protein interactions play a major role in most cellular processes. Thus, the challenge of identifying the full repertoire of interacting proteins in the cell is o...
Ariel Jaimovich, Gal Elidan, Hanah Margalit, Nir F...