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BIBE
2004
IEEE
115views Bioinformatics» more  BIBE 2004»
13 years 11 months ago
Discovering Novel Interacting Motif Pairs from Large Protein-Protein Interaction Datasets
Current motif discovery methods can only detect individual motifs in groups of protein sequences--they do not discover potentially-interacting motif pairs underlying the interacti...
Soon-Heng Tan, Wing-Kin Sung, See-Kiong Ng
JCB
2008
82views more  JCB 2008»
13 years 6 months ago
Determining Nucleolar Association from Sequence by Leveraging Protein-Protein Interactions
Controlled intra-nuclear organisation of proteins is critical for sustaining correct function of the cell. Proteins and RNA are transported by passive diffusion and associate with...
Mikael Bodén, Rohan D. Teasdale
IJBRA
2008
97views more  IJBRA 2008»
13 years 7 months ago
Extracting Protein-Protein Interactions from MEDLINE using the Hidden Vector State model
: A major challenge in text mining for biomedicine is automatically extracting protein-protein interactions from the vast amount of biomedical literature. We have constructed an in...
Deyu Zhou, Yulan He, Chee Keong Kwoh
TCBB
2010
144views more  TCBB 2010»
13 years 2 months ago
Querying Graphs in Protein-Protein Interactions Networks Using Feedback Vertex Set
Recent techniques increase rapidly the amount of our knowledge on interactions between proteins. The interpretation of these new information depends on our ability to retrieve kno...
Guillaume Blin, Florian Sikora, Stéphane Vi...
TCBB
2010
163views more  TCBB 2010»
13 years 2 months ago
Classification of Protein-Protein Interaction Full-Text Documents Using Text and Citation Network Features
Abstract--We participated (as Team 9) in the Article Classification Task of the Biocreative II.5 Challenge: binary classification of fulltext documents relevant for protein-protein...
Artemy Kolchinsky, Alaa Abi-Haidar, Jasleen Kaur, ...