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» Prediction of protein structural class with Rough Sets
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DMKD
2003
ACM
110views Data Mining» more  DMKD 2003»
14 years 1 months ago
Weave amino acid sequences for protein secondary structure prediction
Given a known protein sequence, predicting its secondary structure can help understand its three-dimensional (tertiary) structure, i.e., the folding. In this paper, we present an ...
Xiaochun Yang, Bin Wang
BMCBI
2008
128views more  BMCBI 2008»
13 years 8 months ago
Pairwise covariance adds little to secondary structure prediction but improves the prediction of non-canonical local structure
Background: Amino acid sequence probability distributions, or profiles, have been used successfully to predict secondary structure and local structure in proteins. Profile models ...
Christopher Bystroff, Bobbie-Jo M. Webb-Robertson
ISMIS
2005
Springer
14 years 2 months ago
Subsystem Based Generalizations of Rough Set Approximations
Abstract. Subsystem based generalizations of rough set approximations are investigated. Instead of using an equivalence relation, an arbitrary binary relation is used to construct ...
Yiyu Yao, Yaohua Chen
ICIC
2007
Springer
14 years 2 months ago
Rough Set Theory of Shape Perception
Humans can easily recognize complex objects even if values of their attributes are imprecise and often inconsistent. It is not clear how the brain processes uncertain visual inform...
Andrzej W. Przybyszewski
APBC
2004
123views Bioinformatics» more  APBC 2004»
13 years 10 months ago
Empirical Knowledge and Genetic Algorithms for Selection of Amide I Frequencies in Protein Secondary Structure Prediction
Here we investigate an extension of a previously suggested "automatic amide I frequency selection procedure" where we introduce an additional criterion utilizing empiric...
Joachim A. Hering, Peter R. Innocent, Parvez I. Ha...