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    BIBM
    2008
    IEEE
    125views Bioinformatics» more  BIBM 2008»
    Systems Biology via Redescription and Ontologies (III): Protein Classification Using Malaria Parasite's Temporal Transcriptomic
    13 years 8 months ago
    Systems Biology via Redescription and Ontologies (III): Protein Classification Using Malaria Parasite's Temporal Transcriptomic
    Download  www.columbia.edu
    This paper addresses the protein classification problem, and explores how its accuracy can be improved by using information from time-course gene expression data. The methods are ...
    Antonina Mitrofanova, Samantha Kleinberg, Jane Car...
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    JIB
    2006
    220views more  JIB 2006»
    An assessment of machine and statistical learning approaches to inferring networks of protein-protein interactions
    13 years 8 months ago
    An assessment of machine and statistical learning approaches to inferring networks of protein-protein interactions
    Download  journal.imbio.de
    Protein-protein interactions (PPI) play a key role in many biological systems. Over the past few years, an explosion in availability of functional biological data obtained from hi...
    Fiona Browne, Haiying Wang, Huiru Zheng, Francisco...
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    BMCBI
    2008
    127views more  BMCBI 2008»
    Gene and pathway identification with Lp penalized Bayesian logistic regression
    13 years 8 months ago
    Gene and pathway identification with Lp penalized Bayesian logistic regression
    Download  www.biomedcentral.com
    Background: Identifying genes and pathways associated with diseases such as cancer has been a subject of considerable research in recent years in the area of bioinformatics and co...
    Zhenqiu Liu, Ronald B. Gartenhaus, Ming Tan, Feng ...
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    BIOCOMP
    2008
    135views Bioinformatics» more  BIOCOMP 2008»
    Prediction of Protein Function Using Graph Container and Message Passing
    13 years 10 months ago
    Prediction of Protein Function Using Graph Container and Message Passing
    Download  www.cs.siu.edu
    We introduce a novel parameter called container flux, which is used to measure the information sharing capacity between two distinct nodes in a graph. Other useful information, bot...
    Hongbo Zhou, Qiang Shawn Cheng, Mehdi Zargham
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    BMCBI
    2006
    118views more  BMCBI 2006»
    Djinn Lite: a tool for customised gene transcript modelling, annotation-data enrichment and exploration
    13 years 8 months ago
    Djinn Lite: a tool for customised gene transcript modelling, annotation-data enrichment and exploration
    Download  www.biomedcentral.com
    Background: There is an ever increasing rate of data made available on genetic variation, transcriptomes and proteomes. Similarly, a growing variety of bioinformatic programs are ...
    Erdahl T. Teber, Edward Crawford, Kent B. Bolton, ...
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