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JMLR
2012
11 years 10 months ago
NIMFA: A Python Library for Nonnegative Matrix Factorization
NIMFA is an open-source Python library that provides a unified interface to nonnegative matrix factorization algorithms. It includes implementations of state-of-the-art factoriza...
Marinka Zitnik, Blaz Zupan
BMCBI
2007
105views more  BMCBI 2007»
13 years 7 months ago
Finding regulatory elements and regulatory motifs: a general probabilistic framework
Over the last two decades a large number of algorithms has been developed for regulatory motif finding. Here we show how many of these algorithms, especially those that model bind...
Erik van Nimwegen
AUTOMATICA
2006
70views more  AUTOMATICA 2006»
13 years 7 months ago
A Toeplitz algorithm for polynomial J-spectral factorization
A block Toeplitz algorithm is proposed to perform the J-spectral factorization of a para-Hermitian polynomial matrix. The input matrix can be singular or indefinite, and it can ha...
Juan Carlos Zúñiga, Didier Henrion
ICML
2010
IEEE
13 years 5 months ago
Implicit Regularization in Variational Bayesian Matrix Factorization
Matrix factorization into the product of lowrank matrices induces non-identifiability, i.e., the mapping between the target matrix and factorized matrices is not one-to-one. In th...
Shinichi Nakajima, Masashi Sugiyama
EUROPAR
2003
Springer
14 years 21 days ago
Improving Performance of Hypermatrix Cholesky Factorization
Abstract. This paper shows how a sparse hypermatrix Cholesky factorization can be improved. This is accomplished by means of efficient codes which operate on very small dense matri...
José R. Herrero, Juan J. Navarro