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» Probabilistic base calling of Solexa sequencing data
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ICWS
2009
IEEE
14 years 4 months ago
Flexible Probabilistic QoS Management of Transaction Based Web Services Orchestrations
—In this paper we extend our previous work on soft probabilistic contracts for QoS management, from the particular case of “response time”, to general QoS parameters. Our stu...
Sidney Rosario, Albert Benveniste, Claude Jard
BMCBI
2008
117views more  BMCBI 2008»
13 years 7 months ago
A probabilistic framework to predict protein function from interaction data integrated with semantic knowledge
Background: The functional characterization of newly discovered proteins has been a challenge in the post-genomic era. Protein-protein interactions provide insights into the funct...
Young-Rae Cho, Lei Shi, Murali Ramanathan, Aidong ...
RECOMB
2004
Springer
14 years 8 months ago
A class of edit kernels for SVMs to predict translation initiation sites in eukaryotic mRNAs
The prediction of translation initiation sites (TISs) in eukaryotic mRNAs has been a challenging problem in computational molecular biology. In this paper, we present a new algori...
Haifeng Li, Tao Jiang
SIGMOD
2012
ACM
212views Database» more  SIGMOD 2012»
11 years 10 months ago
Local structure and determinism in probabilistic databases
While extensive work has been done on evaluating queries over tuple-independent probabilistic databases, query evaluation over correlated data has received much less attention eve...
Theodoros Rekatsinas, Amol Deshpande, Lise Getoor
ISMB
1996
13 years 9 months ago
Gene Recognition in Cyanobacterium Genomic Sequence Data Using the Hidden Markov Model
We have developed a hidden Markov model (HMM)to detect the protein coding regions within one megabase contiguous sequence data, registered in a database called GenBankin eight ent...
Tetsushi Yada, Makoto Hirosawa