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» Processing Sequential Patterns in Relational Databases
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BMCBI
2007
174views more  BMCBI 2007»
13 years 7 months ago
ESTuber db: an online database for Tuber borchii EST sequences
Background: The ESTuber database (http://www.itb.cnr.it/estuber) includes 3,271 Tuber borchii expressed sequence tags (EST). The dataset consists of 2,389 sequences from an in-hou...
Barbara Lazzari, Andrea Caprera, Cristian Cosentin...
BMCBI
2008
130views more  BMCBI 2008»
13 years 7 months ago
A database of phylogenetically atypical genes in archaeal and bacterial genomes, identified using the DarkHorse algorithm
Background: The process of horizontal gene transfer (HGT) is believed to be widespread in Bacteria and Archaea, but little comparative data is available addressing its occurrence ...
Sheila Podell, Terry Gaasterland, Eric E. Allen
BNCOD
2003
127views Database» more  BNCOD 2003»
13 years 9 months ago
Performance Evaluation and Analysis of K-Way Join Variants for Association Rule Mining
Data mining aims at discovering important and previously unknown patterns from the dataset in the underlying database. Database mining performs mining directly on data stored in r...
P. Mishra, Sharma Chakravarthy
SSDBM
2010
IEEE
112views Database» more  SSDBM 2010»
13 years 12 months ago
BEMC: A Searchable, Compressed Representation for Large Seismic Wavefields
Abstract. State-of-the-art numerical solvers in Earth Sciences produce multi terabyte datasets per execution. Operating on increasingly larger datasets becomes challenging due to i...
Julio López, Leonardo Ramírez-Guzm&a...
BMCBI
2006
145views more  BMCBI 2006»
13 years 7 months ago
Fast-Find: A novel computational approach to analyzing combinatorial motifs
Background: Many vital biological processes, including transcription and splicing, require a combination of short, degenerate sequence patterns, or motifs, adjacent to defined seq...
Micah Hamady, Erin Peden, Rob Knight, Ravinder Sin...