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» Program Generators and the Tools to Make Them
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BMCBI
2007
102views more  BMCBI 2007»
15 years 4 months ago
FlexOracle: predicting flexible hinges by identification of stable domains
Background: Protein motions play an essential role in catalysis and protein-ligand interactions, but are difficult to observe directly. A substantial fraction of protein motions i...
Samuel Flores, Mark Gerstein
KBSE
2009
IEEE
15 years 10 months ago
A Case for Automated Debugging Using Data Structure Repair
—Automated debugging is becoming increasingly important as the size and complexity of software increases. This paper makes a case for using constraint-based data structure repair...
Muhammad Zubair Malik, Khalid Ghori, Bassem Elkara...
POPL
2008
ACM
16 years 4 months ago
Engineering formal metatheory
Machine-checked proofs of properties of programming languages have become a critical need, both for increased confidence in large and complex designs and as a foundation for techn...
Arthur Charguéraud, Benjamin C. Pierce, Bri...
COMPLIFE
2005
Springer
15 years 9 months ago
Fast and Accurate Structural RNA Alignment by Progressive Lagrangian Optimization
During the last few years new functionalities of RNA have been discovered, renewing the need for computational tools for their analysis. To this respect, multiple sequence alignmen...
Markus Bauer, Gunnar W. Klau, Knut Reinert
BMCBI
2005
130views more  BMCBI 2005»
15 years 4 months ago
MiMiR: a comprehensive solution for storage, annotation and exchange of microarray data
Background: The generation of large amounts of microarray data presents challenges for data collection, annotation, exchange and analysis. Although there are now widely accepted f...
Mahendra Navarange, Laurence Game, Derek Fowler, V...