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» Program comprehension as fact finding
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BMCBI
2007
113views more  BMCBI 2007»
13 years 7 months ago
PILER-CR: Fast and accurate identification of CRISPR repeats
Background: Sequencing of prokaryotic genomes has recently revealed the presence of CRISPR elements: short, highly conserved repeats separated by unique sequences of similar lengt...
Robert C. Edgar
SIGSOFT
2010
ACM
13 years 5 months ago
The missing links: bugs and bug-fix commits
Empirical studies of software defects rely on links between bug databases and program code repositories. This linkage is typically based on bug-fixes identified in developer-enter...
Adrian Bachmann, Christian Bird, Foyzur Rahman, Pr...
ICALP
2009
Springer
14 years 8 months ago
Algorithms for Secretary Problems on Graphs and Hypergraphs
We examine several online matching problems, with applications to Internet advertising reservation systems. Consider an edge-weighted bipartite graph G, with partite sets L, R. We...
Martin Pál, Nitish Korula
BMCBI
2004
151views more  BMCBI 2004»
13 years 7 months ago
Design, implementation and evaluation of a practical pseudoknot folding algorithm based on thermodynamics
Background: The general problem of RNA secondary structure prediction under the widely used thermodynamic model is known to be NP-complete when the structures considered include a...
Jens Reeder, Robert Giegerich
ICDE
2004
IEEE
179views Database» more  ICDE 2004»
14 years 9 months ago
CrossMine: Efficient Classification Across Multiple Database Relations
Most of today's structured data is stored in relational databases. Such a database consists of multiple relations which are linked together conceptually via entity-relationsh...
Xiaoxin Yin, Jiawei Han, Jiong Yang, Philip S. Yu