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» Programming an interpreter using molecular dynamics
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CONCUR
2004
Springer
14 years 1 months ago
A Semantics for Concurrent Separation Logic
We present a trace semantics for a language of parallel programs which share access to mutable data. We introduce a resource-sensitive logic for partial correctness, based on a re...
Stephen D. Brookes
CASES
2007
ACM
14 years 14 days ago
Fragment cache management for dynamic binary translators in embedded systems with scratchpad
Dynamic binary translation (DBT) has been used to achieve numerous goals (e.g., better performance) for general-purpose computers. Recently, DBT has also attracted attention for e...
José Baiocchi, Bruce R. Childers, Jack W. D...
ICFP
2002
ACM
14 years 8 months ago
A demand-driven adaptive type analysis
Compilers for dynamically and statically typed languages ensure safe execution by verifying that all operations are performed on appropriate values. An operation as simple as car ...
Danny Dubé, Marc Feeley
BMCBI
2006
121views more  BMCBI 2006»
13 years 8 months ago
Evaluation of sequence alignments and oligonucleotide probes with respect to three-dimensional structure of ribosomal RNA using
Background: Availability of high-resolution RNA crystal structures for the 30S and 50S ribosomal subunits and the subsequent validation of comparative secondary structure models h...
Yadhu Kumar, Ralf Westram, Peter Kipfer, Harald Me...
IPPS
2008
IEEE
14 years 2 months ago
Overcoming scaling challenges in biomolecular simulations across multiple platforms
NAMD† is a portable parallel application for biomolecular simulations. NAMD pioneered the use of hybrid spatial and force decomposition, a technique now used by most scalable pr...
Abhinav Bhatele, Sameer Kumar, Chao Mei, James C. ...