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118
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RECOMB
2006
Springer
16 years 2 months ago
A Parsimony Approach to Genome-Wide Ortholog Assignment
The assignment of orthologous genes between a pair of genomes is a fundamental and challenging problem in comparative genomics, since many computational methods for solving various...
Zheng Fu, Xin Chen, Vladimir Vacic, Peng Nan, Yang...
OSDI
2006
ACM
16 years 2 months ago
EXPLODE: A Lightweight, General System for Finding Serious Storage System Errors
Storage systems such as file systems, databases, and RAID systems have a simple, basic contract: you give them data, they do not lose or corrupt it. Often they store the only copy...
Junfeng Yang, Can Sar, Dawson R. Engler
143
Voted
OSDI
2004
ACM
16 years 2 months ago
CP-Miner: A Tool for Finding Copy-paste and Related Bugs in Operating System Code
Copy-pasted code is very common in large software because programmers prefer reusing code via copy-paste in order to reduce programming effort. Recent studies show that copy-paste...
Zhenmin Li, Shan Lu, Suvda Myagmar, Yuanyuan Zhou
ICALP
2009
Springer
16 years 2 months ago
Universal Succinct Representations of Trees?
Abstract. We consider the succinct representation of ordinal and cardinal trees on the RAM with logarithmic word size. Given a tree T, our representations support the following ope...
Arash Farzan, Rajeev Raman, S. Srinivasa Rao
ICALP
2009
Springer
16 years 2 months ago
Correlation Clustering Revisited: The "True" Cost of Error Minimization Problems
Correlation Clustering was defined by Bansal, Blum, and Chawla as the problem of clustering a set of elements based on a possibly inconsistent binary similarity function between e...
Nir Ailon, Edo Liberty
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