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WABI
2007
Springer
102views Bioinformatics» more  WABI 2007»
14 years 5 months ago
Homology Search with Fragmented Nucleic Acid Sequence Patterns
The comprehensive annotation of non-coding RNAs in newly sequenced genomes is still a largely unsolved problem because many functional RNAs exhibit not only poorly conserved sequen...
Axel Mosig, Julian J.-L. Chen, Peter F. Stadler
PDP
2010
IEEE
14 years 5 months ago
Skandium: Multi-core Programming with Algorithmic Skeletons
—This paper argues that algorithmic skeletons are a suitable programming model for multi-core architectures. -level abstractions offered by algorithmic skeletons provide a simple...
Mario Leyton, José M. Piquer
KDD
2009
ACM
188views Data Mining» more  KDD 2009»
14 years 11 months ago
Mining discrete patterns via binary matrix factorization
Mining discrete patterns in binary data is important for subsampling, compression, and clustering. We consider rankone binary matrix approximations that identify the dominant patt...
Bao-Hong Shen, Shuiwang Ji, Jieping Ye
JFP
2006
113views more  JFP 2006»
13 years 11 months ago
Efficient manipulation of binary data using pattern matching
Pattern matching is an important operation in functional programs. So far, pattern matching has been investigated in the context of structured terms. This article presents an appr...
Per Gustafsson, Konstantinos F. Sagonas
ENTCS
2006
89views more  ENTCS 2006»
13 years 11 months ago
A Type-theoretic Reconstruction of the Visitor Pattern
In object-oriented languages, the Visitor pattern can be used to traverse tree-like data structures: a visitor object contains some operations, and the data structure objects allo...
Peter Buchlovsky, Hayo Thielecke