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» ProtChew: Automatic Extraction of Protein Names from Biomedi...
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ICDE
2005
IEEE
126views Database» more  ICDE 2005»
14 years 4 months ago
ProtChew: Automatic Extraction of Protein Names from Biomedical Literature
With the increasing amount of biomedical literature, there is a need for automatic extraction of information to support biomedical researchers. Due to incomplete biomedical inform...
Amund Tveit, Rune Sætre, Astrid Lægrei...
BMCBI
2005
251views more  BMCBI 2005»
13 years 11 months ago
Contextual weighting for Support Vector Machines in literature mining: an application to gene versus protein name disambiguation
Background: The ability to distinguish between genes and proteins is essential for understanding biological text. Support Vector Machines (SVMs) have been proven to be very effici...
Tapio Pahikkala, Filip Ginter, Jorma Boberg, Jouni...
WS
2010
ACM
13 years 9 months ago
Structured literature image finder: Parsing text and figures in biomedical literature
The SLIF project combines text-mining and image processing to extract structured information from biomedical literature. SLIF extracts images and their captions from published pap...
Amr Ahmed, Andrew Arnold, Luís Pedro Coelho...
CORR
2010
Springer
83views Education» more  CORR 2010»
13 years 11 months ago
Sentence Simplification Aids Protein-Protein Interaction Extraction
Accurate systems for extracting ProteinProtein Interactions (PPIs) automatically from biomedical articles can help accelerate biomedical research. Biomedical Informatics researche...
Siddhartha Jonnalagadda, Graciela Gonzalez
BMCBI
2005
189views more  BMCBI 2005»
13 years 11 months ago
A sentence sliding window approach to extract protein annotations from biomedical articles
Background: Within the emerging field of text mining and statistical natural language processing (NLP) applied to biomedical articles, a broad variety of techniques have been deve...
Martin Krallinger, Maria Padron, Alfonso Valencia