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» Protein structural similarity search by Ramachandran codes
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BMCBI
2007
148views more  BMCBI 2007»
13 years 7 months ago
Blast sampling for structural and functional analyses
Background: The post-genomic era is characterised by a torrent of biological information flooding the public databases. As a direct consequence, similarity searches starting with ...
Anne Friedrich, Raymond Ripp, Nicolas Garnier, Emm...
IPPS
2007
IEEE
14 years 1 months ago
Automatic Program Segment Similarity Detection in Targeted Program Performance Improvement
Targeted optimization of program segments can provide an additional program speedup over the highest default optimization level, such as -O3 in GCC. The key challenge is how to au...
Haiping Wu, Eunjung Park, Mihailo Kaplarevic, Ying...
ICASSP
2008
IEEE
14 years 2 months ago
Kerdock codes for limited feedback MIMO systems
A codebook based limited feedback strategy is a practical way to obtain partial channel state information at the transmitter in a precoded multiple-input multiple-output (MIMO) wi...
Takao Inoue, Robert W. Heath Jr.
BMCBI
2006
143views more  BMCBI 2006»
13 years 7 months ago
IsoSVM - Distinguishing isoforms and paralogs on the protein level
Background: Recent progress in cDNA and EST sequencing is yielding a deluge of sequence data. Like database search results and proteome databases, this data gives rise to inferred...
Michael Spitzer, Stefan Lorkowski, Paul Cullen, Al...
BMCBI
2006
136views more  BMCBI 2006»
13 years 7 months ago
Java GUI for InterProScan (JIPS): A tool to help process multiple InterProScans and perform ortholog analysis
Background: Recent, rapid growth in the quantity of available genomic data has generated many protein sequences that are not yet biochemically classified. Thus, the prediction of ...
Aijazuddin Syed, Chris Upton