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» Protein structure alignment using elastic shape analysis
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CVPR
2005
IEEE
14 years 10 months ago
Joint Nonparametric Alignment for Analyzing Spatial Gene Expression Patterns in Drosophila Imaginal Discs
To compare spatial patterns of gene expression, one must analyze a large number of images as current methods are only able to measure a small number of genes at a time. Bringing i...
Parvez Ahammad, Cyrus L. Harmon, Ann Hammonds, Sha...
CANDC
2006
ACM
13 years 8 months ago
Hydrophobic collapse in (in silico) protein folding
A model of hydrophobic collapse, which is treated as the driving force for protein folding, is presented. This model is the superposition of three models commonly used in protein ...
Michal Brylinski, Leszek Konieczny, Irena Roterman
BMCBI
2004
150views more  BMCBI 2004»
13 years 8 months ago
Inter-residue distances derived from fold contact propensities correlate with evolutionary substitution costs
Background: The wealth of information on protein structure has led to a variety of statistical analyses of the role played by individual amino acid types in the protein fold. In p...
Gareth Williams, Patrick Doherty
NAR
2011
274views Computer Vision» more  NAR 2011»
13 years 3 months ago
A series of PDB related databases for everyday needs
The Protein Data Bank (PDB) is the world-wide repository of macromolecular structure information. We present a series of databases that run parallel to the PDB. Each database hold...
Robbie P. Joosten, Tim A. H. te Beek, Elmar Kriege...
CERA
2002
201views more  CERA 2002»
13 years 8 months ago
CAD-Based Shape Optimization Using a Meshfree Method
: A shape design sensitivity analysis and optimization procedure is proposed using a meshfree method. A CAD tool connection is established to facilitate the seamless integration of...
Iulian Grindeanu, Nam Ho Kim, Kung K. Choi, Jiun-S...