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    IJBRA
    2007
    52views more  IJBRA 2007»
    Proteomic data mining using predicted peptide chromatographic retention times
    13 years 10 months ago
    Proteomic data mining using predicted peptide chromatographic retention times
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    Brian Tripet, Megha Renuka Jayadev, Don Blow, Cao ...
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    BMCBI
    2007
    157views more  BMCBI 2007»
    Statistical learning of peptide retention behavior in chromatographic separations: a new kernel-based approach for computational
    13 years 11 months ago
    Statistical learning of peptide retention behavior in chromatographic separations: a new kernel-based approach for computational
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    Background: High-throughput peptide and protein identification technologies have benefited tremendously from strategies based on tandem mass spectrometry (MS/MS) in combination wi...
    Nico Pfeifer, Andreas Leinenbach, Christian G. Hub...
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    BMCBI
    2007
    127views more  BMCBI 2007»
    The EIPeptiDi tool: enhancing peptide discovery in ICAT-based LC MS/MS experiments
    13 years 11 months ago
    The EIPeptiDi tool: enhancing peptide discovery in ICAT-based LC MS/MS experiments
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    Background: Isotope-coded affinity tags (ICAT) is a method for quantitative proteomics based on differential isotopic labeling, sample digestion and mass spectrometry (MS). The me...
    Mario Cannataro, Giovanni Cuda, Marco Gaspari, Ser...
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    BMCBI
    2007
    166views more  BMCBI 2007»
    Optimization of filtering criterion for SEQUEST database searching to improve proteome coverage in shotgun proteomics
    13 years 11 months ago
    Optimization of filtering criterion for SEQUEST database searching to improve proteome coverage in shotgun proteomics
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    Background: In proteomic analysis, MS/MS spectra acquired by mass spectrometer are assigned to peptides by database searching algorithms such as SEQUEST. The assignations of pepti...
    Xinning Jiang, Xiaogang Jiang, Guanghui Han, Mingl...
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    BMCBI
    2007
    154views more  BMCBI 2007»
    PepBank - a database of peptides based on sequence text mining and public peptide data sources
    13 years 11 months ago
    PepBank - a database of peptides based on sequence text mining and public peptide data sources
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    Background: Peptides are important molecules with diverse biological functions and biomedical uses. To date, there does not exist a single, searchable archive for peptide sequence...
    Timur Shtatland, Daniel Guettler, Misha Kossodo, M...
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