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BMCBI
2006
115views more  BMCBI 2006»
13 years 8 months ago
AgdbNet - antigen sequence database software for bacterial typing
Background: Bacterial typing schemes based on the sequences of genes encoding surface antigens require databases that provide a uniform, curated, and widely accepted nomenclature ...
Keith A. Jolley, Martin C. J. Maiden
AAAI
1998
13 years 9 months ago
Fast Probabilistic Modeling for Combinatorial Optimization
Probabilistic models have recently been utilized for the optimization of large combinatorial search problems. However, complex probabilistic models that attempt to capture interpa...
Shumeet Baluja, Scott Davies
AH
2008
Springer
14 years 2 months ago
Collection Browsing through Automatic Hierarchical Tagging
In order to navigate huge document collections efficiently, tagged hierarchical structures can be used. For users, it is important to correctly interpret tag combinations. In this ...
Korinna Bade, Marcel Hermkes
BMCBI
2010
142views more  BMCBI 2010»
13 years 8 months ago
pplacer: linear time maximum-likelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree
Background: Likelihood-based phylogenetic inference is generally considered to be the most reliable classification method for unknown sequences. However, traditional likelihood-ba...
Frederick A. Matsen III, Robin B. Kodner, E. Virgi...
DLS
2010
204views Languages» more  DLS 2010»
13 years 6 months ago
Alias analysis for optimization of dynamic languages
Dynamic languages such as Python allow programs to be written more easily using high-level constructs such as comprehensions for queries and using generic code. Efficient executio...
Michael Gorbovitski, Yanhong A. Liu, Scott D. Stol...