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» QNet: A Tool for Querying Protein Interaction Networks
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BMCBI
2010
150views more  BMCBI 2010»
13 years 7 months ago
AMS 3.0: prediction of post-translational modifications
Background: We present here the recent update of AMS algorithm for identification of post-translational modification (PTM) sites in proteins based only on sequence information, us...
Subhadip Basu, Dariusz Plewczynski
NAR
2008
119views more  NAR 2008»
13 years 7 months ago
Phospho.ELM: a database of phosphorylation sites - update 2008
Phospho.ELM is a manually curated database of eukaryotic phosphorylation sites. The resource includes data collected from published literature as well as high-throughput data sets...
Francesca Diella, Cathryn M. Gould, Claudia Chica,...
BMCBI
2010
121views more  BMCBI 2010»
13 years 7 months ago
Knowledge-based annotation of small molecule binding sites in proteins
Background: The study of protein-small molecule interactions is vital for understanding protein function and for practical applications in drug discovery. To benefit from the rapi...
Ratna R. Thangudu, Manoj Tyagi, Benjamin A. Shoema...
NAR
2011
182views Computer Vision» more  NAR 2011»
12 years 10 months ago
PAIR: the predicted Arabidopsis interactome resource
The predicted Arabidopsis interactome resource (PAIR, http://www.cls.zju.edu.cn/pair/), comprised of 5990 experimentally reported molecular interactions in Arabidopsis thaliana to...
Mingzhi Lin, Xueling Shen, Xin Chen
DEBU
2008
187views more  DEBU 2008»
13 years 7 months ago
Social SQL: Tools for Exploring Social Databases
Social media are constructed from the collective contributions of potentially millions of individuals and present an increasingly common and large scale form of database. As these...
Marc A. Smith, Vladimir Barash