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RIVF
2008
13 years 9 months ago
Speeding up subset seed algorithm for intensive protein sequence comparison
Abstract--Sequence similarity search is a common and repeated task in molecular biology. The rapid growth of genomic databases leads to the need of speeding up the treatment of thi...
Van Hoa Nguyen, Dominique Lavenier
JCB
2008
159views more  JCB 2008»
13 years 7 months ago
BayesMD: Flexible Biological Modeling for Motif Discovery
We present BayesMD, a Bayesian Motif Discovery model with several new features. Three different types of biological a priori knowledge are built into the framework in a modular fa...
Man-Hung Eric Tang, Anders Krogh, Ole Winther
SIGMOD
2005
ACM
178views Database» more  SIGMOD 2005»
14 years 7 months ago
Towards Effective Indexing for Very Large Video Sequence Database
With rapid advances in video processing technologies and ever fast increments in network bandwidth, the popularity of video content publishing and sharing has made similarity sear...
Heng Tao Shen, Beng Chin Ooi, Xiaofang Zhou
BMCBI
2007
175views more  BMCBI 2007»
13 years 7 months ago
CLUSS: Clustering of protein sequences based on a new similarity measure
Background: The rapid burgeoning of available protein data makes the use of clustering within families of proteins increasingly important. The challenge is to identify subfamilies...
Abdellali Kelil, Shengrui Wang, Ryszard Brzezinski...
ADC
2007
Springer
183views Database» more  ADC 2007»
13 years 11 months ago
Efficient Similarity Search by Summarization in Large Video Database
With the explosion of video data, video processing technologies have advanced quickly and been applied into many fields, such as advertisements, medical etc.. To fast search these...
Xiangmin Zhou, Xiaofang Zhou, Heng Tao Shen