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BMCBI
2005
121views more  BMCBI 2005»
13 years 8 months ago
Automated methods of predicting the function of biological sequences using GO and BLAST
Background: With the exponential increase in genomic sequence data there is a need to develop automated approaches to deducing the biological functions of novel sequences with hig...
Craig E. Jones, Ute Baumann, Alfred L. Brown
SAC
2006
ACM
14 years 2 months ago
Looking for monotonicity properties of a similarity constraint on sequences
Constraint-based mining techniques on sequence databases have been studied extensively the last few years and efficient algorithms enable to compute complete collections of patte...
Ieva Mitasiunaite, Jean-François Boulicaut
CSR
2006
Springer
14 years 20 days ago
Fast Motif Search in Protein Sequence Databases
Regular expression pattern matching is widely used in computational biology. Searching through a database of sequences for a motif (a simple regular expression), or its variations...
Elena Zheleva, Abdullah N. Arslan
BMCBI
2005
111views more  BMCBI 2005»
13 years 8 months ago
Improving interoperability between microbial information and sequence databases
Background: Biological resources are essential tools for biomedical research. Their availability is promoted through on-line catalogues. Common Access to Biological Resources and ...
Paolo Romano, Peter Dawyndt, Francesca Piersigilli...
BMCBI
2005
115views more  BMCBI 2005»
13 years 8 months ago
Statistical distributions of optimal global alignment scores of random protein sequences
Background: The inference of homology from statistically significant sequence similarity is a central issue in sequence alignments. So far the statistical distribution function un...
Hongxia Pang, Jiaowei Tang, Su-Shing Chen, Shiheng...